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Dependency Direction

Dependency direction in bijux-proteomics-lab should make ownership more obvious as the package grows, not less. Imports that save a little time but hide who owns meaning are structural debt.

Direction Rules

  • consume recommendation and evidence inputs without re-owning scoring or knowledge semantics
  • keep shared meaning in foundation and durable program contracts in core instead of copying them locally
  • treat repositories as lab state boundaries, not as generic execution infrastructure

First Proof Check

  • imports in packages/bijux-proteomics-lab/src/bijux_proteomics_lab
  • package tests that exercise the seam
  • neighboring handbooks when dependency pressure crosses a boundary