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CLI Surface

CLI documentation should describe the commands the package truly owns, not the commands a reader might wish existed.

Package Surface

  • there is no standalone operator CLI product owned directly by this package
  • decision workflows should be demonstrated through imports, reports, or downstream orchestration layers
  • if a CLI appears necessary, it should still expose decision reasoning rather than runtime control

First Proof Check

  • src/bijux_proteomics_intelligence/candidates.py, policies.py, and evaluators.py
  • src/bijux_proteomics_intelligence/report/, briefs.py, and outcomes.py
  • packages/bijux-proteomics-intelligence/tests