Common Workflows

Common workflows should sound like the real jobs people do with the package, not generic process filler.

Operating Rules

• compare recommendation changes against the evidence and contract inputs that drove them
• review whether candidate, judgment, or posture changes improve explanation as well as ranking
• update example outputs when a public recommendation artifact changes

First Proof Check

• src/bijux_proteomics_intelligence/candidates/, judgment/, and posture/
• src/bijux_proteomics_intelligence/reviews/, interpretation/, and learning/
• packages/bijux-proteomics-intelligence/tests