Animal intake recovery review¶

Public posture: sample_recovery_still_partial_and_project_gaps_explicit
Tracked projects: 40
Ready for publication review: 8
Blocked projects: 26
Implausibly low recovery projects: 8

Sample Evidence Depth¶

sample identity only: 0
sample with site: 124
sample with site and chronology: 268
sample with site chronology and coordinates: 502

Top Gap Projects¶

Project	Species	Gap status	Minimum gap	Reasons
`PRJEB31621`	`Bos taurus`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap`
`PRJEB75467`	`Bos taurus`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap`
`PRJNA705960`	`Bos taurus`	`minimum_expected_floor_met`	`0`	`site_assignment_gap; coordinate_precision_gap; missing_primary_paper_linkage`
`KU605068-KU605080`	`Camelus dromedarius`	`recovered_to_exact_expected_count`	`0`	`site_assignment_gap; chronology_gap`
`SRP073444`	`Camelus dromedarius`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap`
`KX379528-KX379529`	`Canis lupus familiaris`	`recovered_to_exact_expected_count`	`0`	`site_assignment_gap; chronology_gap`
`SRS1407451`	`Canis lupus familiaris`	`recovered_to_exact_expected_count`	`0`	`site_assignment_gap; coordinate_precision_gap`
`SRS1407453`	`Canis lupus familiaris`	`recovered_to_exact_expected_count`	`0`	`site_assignment_gap; chronology_gap`
`PRJEB43564`	`Equus asinus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB50952`	`Equus asinus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB52590`	`Equus asinus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB52849`	`Equus asinus`	`extractable_sources_but_no_governed_samples`	`0`	`coordinate_precision_gap; missing_primary_paper_linkage`
`PRJEB10854`	`Equus caballus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB56293`	`Equus caballus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB7537`	`Equus caballus`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`
`PRJEB81815`	`Felis catus`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap; coordinate_precision_gap`
`PRJNA1178732`	`Felis catus`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap`
`PRJEB41594`	`Ovis aries`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap`
`PRJEB59481`	`Ovis aries`	`extractable_sources_but_no_governed_samples`	`1`	`implausibly_low_sample_recovery; sample_recovery_gap; coordinate_precision_gap`
`PRJEB61808`	`Ovis aries`	`extractable_sources_but_no_governed_samples`	`0`	`missing_primary_paper_linkage`

Direct Links¶

project_recovery_stage_review: data/adna/governance/source_library/project_recovery_stage_review.json
project_expected_sample_yield_review: data/adna/governance/source_library/project_expected_sample_yield_review.json
paper_expected_sample_yield_review: data/adna/governance/source_library/paper_expected_sample_yield_review.json
species_project_deficit_ledger: data/adna/governance/source_library/species_project_deficit_ledger.json
manual_curation_worklist: data/adna/governance/source_library/manual_curation_worklist.json
source_recovery_progress: data/adna/governance/source_library/source_recovery_progress.json
missing_source_queue: data/adna/governance/source_library/missing_source_queue.json
source_recovery_release_guard: data/adna/governance/source_library/source_recovery_release_guard.json