Operations

Use make targets from repository root for standard maintainer workflows.

bijux-proteomics-dev provides the implementation behind those commands so operations stay consistent locally and in CI.

Core commands:

• make quality for docs checks and static quality gates
• make api for repository API schema lint, freeze, and drift checks
• make api-freeze for schema freeze integrity checks only
• make security for Bandit, pip-audit gating, and dependency policy checks
• make openapi-drift for OpenAPI backward-compatibility policy
• make architecture-check for repository architecture and debt guards
• make manage_examples and make manage_models for maintainer utility flows